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Code For Simulating Coalescent Tree In R
Code For Simulating Coalescent Tree In R -
payload allShortcutsEnabled false fileTree R items name beeswarm plot R path R beeswarm plot R contentType file name coalescent sim R
sumstat trees R tools R RoxygenNote 7 2 3 NeedsCompilation yes Maintainer Dirk Metzler metzler bio lmu de Repository CRAN coala package A Framework for Coalescent Simulation in R Description This package allows to specify and simulate coalescent models from within R The introduction
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Code Expiry and Limitations
Gene Family Evolution And The Labeled Coalescent Tree A The Unified Download Scientific
Gene Family Evolution And The Labeled Coalescent Tree A The Unified Download Scientific
The strings are interpreted as R expressions so should be written just as you would write other R code The keywod parms that appears in the rate equations is a list of parameters Now let s simulate a coalescent tree conditioning on this demographic process tre sim co tree list beta 1 5 gamma 1
12 1 coalescentMCMC Run MCMC for Coalescent Trees These are the main function of the package to run a Markov chain Monte Carlo MCMC to generate a set of trees which is returned with their likelihoods the coalescent likelihoods and the respective parameter s The method returns the average log likelihood of the coalescent model and
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The Coalescent
The Coalescent
A Framework for Coalescent Simulation Documentation for package coala version 0 7 1 DESCRIPTION file User guides package vignettes and other documentation Package NEWS Help Pages
It provides a unified interface for specifying coalescent models in R R Core Team 2015 automatically selects a suitable simulator transparently conducts the simulations parses the results and calculates additional statistics from the output 2 Implementation The primary design goal of coala is extensibility
Frequently Asked Questions (FAQs)
Verdict
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PPT Coalescent Theory PowerPoint Presentation Free Download ID 4135150
The Labeled Coalescent Tree A Evolution Is Represented Using The LCT Download Scientific
Check more sample of Code For Simulating Coalescent Tree In R below
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Code For Simulating Coalescent Tree In R
sumstat trees R tools R RoxygenNote 7 2 3 NeedsCompilation yes Maintainer Dirk Metzler metzler bio lmu de Repository CRAN coala package A Framework for Coalescent Simulation in R Description This package allows to specify and simulate coalescent models from within R The introduction
More Code For Simulating Coalescent Tree In R
Code Issues 5 Pull requests Actions Projects Security Insights master 1 branch 0 tags 107 commits example Update yeastML rooted gene trees 2 years ago misc update 3 years ago gitattributes Initial commit 4 years ago LICENSE Initial commit 4 years ago MSC geneTr simulator R Update MSC geneTr simulator R 3 years ago README md Update README md
sumstat trees R tools R RoxygenNote 7 2 3 NeedsCompilation yes Maintainer Dirk Metzler metzler bio lmu de Repository CRAN coala package A Framework for Coalescent Simulation in R Description This package allows to specify and simulate coalescent models from within R The introduction
Code Issues 5 Pull requests Actions Projects Security Insights master 1 branch 0 tags 107 commits example Update yeastML rooted gene trees 2 years ago misc update 3 years ago gitattributes Initial commit 4 years ago LICENSE Initial commit 4 years ago MSC geneTr simulator R Update MSC geneTr simulator R 3 years ago README md Update README md
Coalescent Simulation And Phylogenetic Network Analysis From The Download Scientific Diagram
PDF CoaTran Coalescent Tree Simulation Along A Transmission Network
Evolutionary History For The 6th Fragment In The Coalescent Simulation Download Scientific
Simulation Of Optimal Trajectories Along The Tree Using Gaussian Download Scientific Diagram
The New Method Schematic In Step 1 Coalescent Trees For The Aligned Download Scientific
An Example Of The Coalescent rate Process Firstly Coalescent Trees Download Scientific
An Example Of The Coalescent rate Process Firstly Coalescent Trees Download Scientific
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